Misannotation in the GTDB226 Ref Database

Bacterial Taxonomy
3

Hi Donovan,

Thank you for your response. Based on the checks we did, would it be safe to remove the GB_GCA_937980385.1~CALJPV010000086.1 annotation? I ask this because :-

  1. The sequences are exactly identical.
  2. We expect Akkermansia in the environment we are trying to analyze.
  3. When we NCBI BLAST the representative sequence, it does not even match with the phylum Actinomycetota.

Thank you.