Hi everyone. I’m a bit confused about some differences I noticed between the newick tree that can be downloaded from the GTDB repository (currently using bac120_r95.tree) and the taxonomy found on GTDB - Tree. It’s probably something trivial that I’m missing.
I am trying to make a tree that shows the relation between selected genuses by pruning the bac120_r95.tree tree. One genus that I want to show is g__Rubinisphaera . This genus (and others) is present on the website, but not in the newick tree file, how come? Is there another tree file that contains it?