Hi all, I just started using GTDB and I am really impressed by this endeavor, wonderful work, and I’m excited to improve my working taxonomies!
I just ran the tool for the first time on some refseq complete genomes that I’m interested in, and it looks like the output tree has only the GTDB unique IDs or sometimes just the taxonomic rank plus taxa name (e.g. “g Leptolinea”). I’m wondering how I can associate these back to the original input IDs? I don’t see the GTDB ID column in the summary table either. Am I missing something?
Thanks a lot for clarification and continued work on this project. It’s a game changer.