|
About the GTDB-Tk category
|
|
0
|
905
|
August 4, 2020
|
|
GTDB-Tk 226 Database Issue - Missing FastANI Directory and Reference Genome Errors
|
|
1
|
11
|
October 31, 2025
|
|
GTDB version on KBase
|
|
1
|
15
|
October 21, 2025
|
|
Certificate has expired
|
|
1
|
23
|
October 11, 2025
|
|
Installation problems
|
|
1
|
24
|
September 23, 2025
|
|
The GTDB-Tk results and mash distance
|
|
5
|
40
|
July 22, 2025
|
|
How long does classify_wf usually take?
|
|
1
|
80
|
July 2, 2025
|
|
The GTDB-Tk reference data does not exist or is corrupted
|
|
2
|
77
|
June 12, 2025
|
|
Existance of (or how to create) a 'tiny' version of GTDB for use for GTDB-Tk testing
|
|
1
|
87
|
May 9, 2025
|
|
Gtdb-tk align taxa_filter question
|
|
1
|
80
|
January 8, 2025
|
|
GTDB-Tk files count
|
|
3
|
84
|
December 17, 2024
|
|
How is alignment fraction from skani used in screening?
|
|
2
|
102
|
November 8, 2024
|
|
Multiple gtdbtk classify_wf output treefile
|
|
8
|
1741
|
August 21, 2024
|
|
Using classify_wf with low completeness genomes
|
|
0
|
57
|
August 12, 2024
|
|
Decorating Tree from User Archaea MSA
|
|
0
|
79
|
August 8, 2024
|
|
Creating "new taxa" from the de_novo_wf tree
|
|
2
|
125
|
July 31, 2024
|
|
Error in GTDB-Tk v2.4.0, gtdbtk classify_wf ; ERROR: Error generating Mash sketch:
|
|
4
|
290
|
July 31, 2024
|
|
Keep just my genomes
|
|
1
|
114
|
July 29, 2024
|
|
About "Cannot allocate memory" in gtdbtk classify_wf
|
|
1
|
83
|
July 1, 2024
|
|
GTDB-tk has given confliction results for two genomes using different command
|
|
1
|
179
|
May 7, 2024
|
|
ID association in tree output
|
|
24
|
4434
|
May 6, 2024
|
|
Classification only worked for archaea, bacterial output not created
|
|
0
|
160
|
April 23, 2024
|
|
How to estimate resource requirements for classifying 60k genomes?
|
|
3
|
241
|
March 28, 2024
|
|
GTDB-Tk backbone tree
|
|
1
|
663
|
February 19, 2024
|
|
Eukaryotes classified as new phyla or divergent prokaryotes
|
|
4
|
599
|
October 27, 2023
|
|
When should I use classify_wf instead of da_novo_wf?
|
|
1
|
866
|
October 26, 2023
|
|
How to use my own genome data of only type strains to reconstruct phylogenetic tree using GTDB-Tk software?
|
|
2
|
563
|
October 10, 2023
|
|
Error in gtdbtk-2.3.0, de_novo_wf and test
|
|
2
|
671
|
July 6, 2023
|
|
--no-check-certificate
|
|
0
|
651
|
June 24, 2023
|
|
I would like to narrow down phlygenetic tree only based on type materials
|
|
4
|
701
|
June 13, 2023
|