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About the GTDB-Tk category
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0
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906
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August 4, 2020
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GTDB-Tk 226 Database Issue - Missing FastANI Directory and Reference Genome Errors
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1
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14
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October 31, 2025
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GTDB version on KBase
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1
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16
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October 21, 2025
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Certificate has expired
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1
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24
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October 11, 2025
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Installation problems
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1
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27
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September 23, 2025
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The GTDB-Tk results and mash distance
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5
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40
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July 22, 2025
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How long does classify_wf usually take?
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1
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81
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July 2, 2025
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The GTDB-Tk reference data does not exist or is corrupted
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2
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79
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June 12, 2025
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Existance of (or how to create) a 'tiny' version of GTDB for use for GTDB-Tk testing
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1
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87
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May 9, 2025
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Gtdb-tk align taxa_filter question
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1
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80
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January 8, 2025
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GTDB-Tk files count
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3
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84
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December 17, 2024
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How is alignment fraction from skani used in screening?
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2
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103
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November 8, 2024
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Multiple gtdbtk classify_wf output treefile
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8
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1748
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August 21, 2024
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Using classify_wf with low completeness genomes
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0
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57
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August 12, 2024
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Decorating Tree from User Archaea MSA
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0
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80
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August 8, 2024
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Creating "new taxa" from the de_novo_wf tree
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2
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127
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July 31, 2024
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Error in GTDB-Tk v2.4.0, gtdbtk classify_wf ; ERROR: Error generating Mash sketch:
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4
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292
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July 31, 2024
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Keep just my genomes
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1
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115
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July 29, 2024
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About "Cannot allocate memory" in gtdbtk classify_wf
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1
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83
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July 1, 2024
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GTDB-tk has given confliction results for two genomes using different command
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1
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179
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May 7, 2024
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ID association in tree output
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24
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4445
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May 6, 2024
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Classification only worked for archaea, bacterial output not created
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0
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160
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April 23, 2024
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How to estimate resource requirements for classifying 60k genomes?
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3
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242
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March 28, 2024
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GTDB-Tk backbone tree
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1
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664
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February 19, 2024
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Eukaryotes classified as new phyla or divergent prokaryotes
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4
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599
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October 27, 2023
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When should I use classify_wf instead of da_novo_wf?
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1
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869
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October 26, 2023
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How to use my own genome data of only type strains to reconstruct phylogenetic tree using GTDB-Tk software?
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2
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565
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October 10, 2023
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Error in gtdbtk-2.3.0, de_novo_wf and test
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2
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672
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July 6, 2023
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--no-check-certificate
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0
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651
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June 24, 2023
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I would like to narrow down phlygenetic tree only based on type materials
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4
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703
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June 13, 2023
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