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About the GTDB-Tk category
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0
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336
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August 4, 2020
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Convert Gtdbtk itol tree taxonomy into NCBI itol tree taxonomy
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0
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18
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March 16, 2023
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[de_novo_wf] taxa with multiple placements of equal quality
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1
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20
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March 16, 2023
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How can I use the --mash_db option of classify_wf
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5
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156
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February 18, 2023
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Error during gtdbtk classify_wf : No such gtdbtk.bac120.summary.tsv
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1
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108
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January 11, 2023
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Visualize GTDB classification
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5
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165
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December 7, 2022
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Issues with downloading the latest version (2.1.1) and mapping the reference data
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1
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166
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December 2, 2022
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What would it take to adapt GTDB-Tk for protista and single-celled fungi?
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2
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202
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November 15, 2022
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I made a Snakemake Workflow for GTDB-tk
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0
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129
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October 24, 2022
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Error during gtdbtk classify_wf
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1
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237
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October 23, 2022
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Migration guide from GTDBTk v1.x to v2.x
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0
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125
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September 29, 2022
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Can "Identify" also output Nucleotide sequences?
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3
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128
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August 10, 2022
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GTDB-TK without full data download?
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1
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195
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July 2, 2022
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Multiple gtdbtk classify_wf output treefile
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1
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213
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May 16, 2022
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`gtdbtk` meaning of numbers in internal node names in the output tree
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3
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216
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April 7, 2022
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Gtdb installation
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1
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428
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March 18, 2022
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ID association in tree output
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21
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1603
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March 14, 2022
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Misleading taxonomy assignments
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1
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298
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December 1, 2021
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Why to recalculate RED values?
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2
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349
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August 9, 2021
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Filtration of results based on CheckM
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2
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414
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July 28, 2021
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How does GTDB-Tk handle protists like single-cell algae and diatoms?
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1
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257
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July 26, 2021
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GTDB-Tk tree related questions
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7
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948
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June 12, 2021
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How to run interrupted job from checkpoint instead of starting over?
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1
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535
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June 10, 2021
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Is it possible to filter the markers for a specific genus?
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1
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296
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March 2, 2021
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What format are newick trees and how to extract specific node?
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3
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3040
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February 15, 2021
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Using GTDB-Tk with gene binning tools
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1
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416
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December 11, 2020
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Ani_rep reference sketches
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2
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359
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December 1, 2020
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Performance of FastANI step
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1
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427
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November 6, 2020
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Resource usage optimization question
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1
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373
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October 27, 2020
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Add own marker for tree inference?
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1
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362
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August 19, 2020
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