About the GTDB-Tk category
|
|
0
|
282
|
August 4, 2020
|
Error during gtdbtk classify_wf : No such gtdbtk.bac120.summary.tsv
|
|
1
|
28
|
January 11, 2023
|
Visualize GTDB classification
|
|
5
|
100
|
December 7, 2022
|
Issues with downloading the latest version (2.1.1) and mapping the reference data
|
|
1
|
95
|
December 2, 2022
|
What would it take to adapt GTDB-Tk for protista and single-celled fungi?
|
|
2
|
129
|
November 15, 2022
|
I made a Snakemake Workflow for GTDB-tk
|
|
0
|
73
|
October 24, 2022
|
Error during gtdbtk classify_wf
|
|
1
|
93
|
October 23, 2022
|
Migration guide from GTDBTk v1.x to v2.x
|
|
0
|
75
|
September 29, 2022
|
Can "Identify" also output Nucleotide sequences?
|
|
3
|
82
|
August 10, 2022
|
GTDB-TK without full data download?
|
|
1
|
129
|
July 2, 2022
|
Multiple gtdbtk classify_wf output treefile
|
|
1
|
151
|
May 16, 2022
|
`gtdbtk` meaning of numbers in internal node names in the output tree
|
|
3
|
158
|
April 7, 2022
|
Gtdb installation
|
|
1
|
291
|
March 18, 2022
|
ID association in tree output
|
|
21
|
1340
|
March 14, 2022
|
Misleading taxonomy assignments
|
|
1
|
242
|
December 1, 2021
|
Why to recalculate RED values?
|
|
2
|
287
|
August 9, 2021
|
Filtration of results based on CheckM
|
|
2
|
323
|
July 28, 2021
|
How does GTDB-Tk handle protists like single-cell algae and diatoms?
|
|
1
|
202
|
July 26, 2021
|
GTDB-Tk tree related questions
|
|
7
|
778
|
June 12, 2021
|
How to run interrupted job from checkpoint instead of starting over?
|
|
1
|
448
|
June 10, 2021
|
Is it possible to filter the markers for a specific genus?
|
|
1
|
249
|
March 2, 2021
|
What format are newick trees and how to extract specific node?
|
|
3
|
2080
|
February 15, 2021
|
Using GTDB-Tk with gene binning tools
|
|
1
|
344
|
December 11, 2020
|
Ani_rep reference sketches
|
|
2
|
299
|
December 1, 2020
|
Performance of FastANI step
|
|
1
|
357
|
November 6, 2020
|
Resource usage optimization question
|
|
1
|
313
|
October 27, 2020
|
Add own marker for tree inference?
|
|
1
|
308
|
August 19, 2020
|