GTDB taxonomy of bv-brc (formerly Patric) genomes
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2
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458
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February 14, 2024
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Scoring representative genomes
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2
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222
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February 6, 2024
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Retrieve the number of species represented by a single genome
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2
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240
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February 6, 2024
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Is GTDB including all species from NCBI bacteria refseq?
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1
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294
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January 24, 2024
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Missing genera in NCBI / GTDB mapping files
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1
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277
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January 8, 2024
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How to obtain reference genome sequences in GTDB database
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6
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1041
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December 14, 2023
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Growth temperature metadata for GTDB
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0
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311
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December 1, 2023
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Genomes download
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1
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477
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November 22, 2023
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The ANI between species within a same genus is notably low
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2
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520
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October 27, 2023
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Downloading the genomes of all Staphylococcus saprophyticus available in GTDB
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2
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641
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October 15, 2023
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MD5SUM.txt not matching filenames on latest
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0
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488
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July 3, 2023
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MD5SUM filename
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1
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699
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January 19, 2023
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Will proGenomes3 be included in future releases of GTDB?
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4
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656
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June 21, 2023
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Why many gtdb representative genome pairs has ANI >95%?
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4
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648
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June 9, 2023
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Whether the sequence direction is consistent in GTDB Data?
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2
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635
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June 2, 2023
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Imminent release?
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2
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603
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March 13, 2023
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How to see the differences between v202 and v207 releases?
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1
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786
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March 2, 2023
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What is the relationship between taxa with suffixes and taxa without suffixes?
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2
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672
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February 10, 2023
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All genomes in gtdb v207 (not representative but all 317,542 genomes)
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6
|
775
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February 9, 2023
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Plastid and mitochondrial sequences in GTDB?
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2
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604
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January 13, 2023
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Doubt about Genome QC methods
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4
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626
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November 29, 2022
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The GTDB corresponding NCBI species name
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3
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974
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October 21, 2022
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What's the content of gtdb_proteins_aa_reps file
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0
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555
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September 29, 2022
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Representative genomes for higher taxonomic orders
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1
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584
|
July 4, 2022
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16S, 23S and ssu_all_r207
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3
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1442
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June 27, 2022
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How to submit data to GTDB
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1
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622
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June 15, 2022
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Which NCBI taxonomy version does each release use?
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4
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994
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June 12, 2022
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No FASTA file paths in metadata for release202 bac120 and ar122
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1
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677
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June 12, 2022
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194,600 genomes r95 download
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10
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1541
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May 12, 2022
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Incorrect annotation in the representative genomes
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5
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1033
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April 21, 2022
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