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Will proGenomes3 be included in future releases of GTDB?
|
|
4
|
647
|
June 21, 2023
|
|
Why many gtdb representative genome pairs has ANI >95%?
|
|
4
|
632
|
June 9, 2023
|
|
Whether the sequence direction is consistent in GTDB Data?
|
|
2
|
634
|
June 2, 2023
|
|
Imminent release?
|
|
2
|
601
|
March 13, 2023
|
|
How to see the differences between v202 and v207 releases?
|
|
1
|
773
|
March 2, 2023
|
|
What is the relationship between taxa with suffixes and taxa without suffixes?
|
|
2
|
666
|
February 10, 2023
|
|
All genomes in gtdb v207 (not representative but all 317,542 genomes)
|
|
6
|
761
|
February 9, 2023
|
|
Plastid and mitochondrial sequences in GTDB?
|
|
2
|
597
|
January 13, 2023
|
|
Doubt about Genome QC methods
|
|
4
|
620
|
November 29, 2022
|
|
The GTDB corresponding NCBI species name
|
|
3
|
895
|
October 21, 2022
|
|
What's the content of gtdb_proteins_aa_reps file
|
|
0
|
553
|
September 29, 2022
|
|
Representative genomes for higher taxonomic orders
|
|
1
|
583
|
July 4, 2022
|
|
16S, 23S and ssu_all_r207
|
|
3
|
1297
|
June 27, 2022
|
|
How to submit data to GTDB
|
|
1
|
610
|
June 15, 2022
|
|
Which NCBI taxonomy version does each release use?
|
|
4
|
947
|
June 12, 2022
|
|
No FASTA file paths in metadata for release202 bac120 and ar122
|
|
1
|
669
|
June 12, 2022
|
|
194,600 genomes r95 download
|
|
10
|
1516
|
May 12, 2022
|
|
Incorrect annotation in the representative genomes
|
|
5
|
1012
|
April 21, 2022
|
|
Taxon History API vs Web
|
|
2
|
630
|
April 8, 2022
|
|
Could you provide .gbk files in next release?
|
|
2
|
571
|
February 23, 2022
|
|
Quality file from checkm for the newest version r202
|
|
1
|
747
|
December 29, 2021
|
|
Translation tables
|
|
4
|
905
|
December 28, 2021
|
|
Genome sizes for different taxonomic groups
|
|
1
|
545
|
December 1, 2021
|
|
Where can I found universal genie/mark gene set for each database genome
|
|
3
|
651
|
November 16, 2021
|
|
Candidatus
|
|
2
|
635
|
November 8, 2021
|
|
Multiple assembly ids queries
|
|
3
|
455
|
October 26, 2021
|
|
Integration of genomes not submitted to NCBI
|
|
2
|
488
|
October 20, 2021
|
|
Human/other contamination of microbial genomes
|
|
2
|
398
|
October 13, 2021
|
|
Compiling directory comprised of all Escherichia .faa files from the ‘gtdb_proteins_aa_reps’
|
|
0
|
386
|
July 30, 2021
|
|
Some genomes of PRJEB31003 are incorrectly tagged as "Isolate"
|
|
1
|
409
|
July 30, 2021
|